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Searching for motif id 9813

Entry # 9813: 2AAR_j7_0-G831_0-A848_0-U954_0-C982_0-A999_0-G1174_0-C1198

Primary Citation: (from PDB entry 2AAR)

D.BARAM E.PYETAN A.SITTNER T.AUERBACH-NEVO A.BASHAN A.YONATH . STRUCTURE OF TRIGGER FACTOR BINDING DOMAIN IN BIOLOGICALLY HOMOLOGOUS COMPLEX WITH EUBACTERIAL RIBOSOME REVEALS ITS CHAPERONE ACTION PROC.NATL.ACAD.SCI.USA V. 102 12017 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:7-wayCluster:2AAR j7 0-G831 0-A848 0-U954 0-C982 0-A999 0-G1174 0-C1198 
NC-IUBMB Classification:Cluster Page
Angles: 16:38:44:49:57:63:68:70:76:107:111:115:117:122:130:135:140:144:159:168:175°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.10533Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CAGC 4nt

Strand 2: Chain 0: CGAAAUG 7nt

Strand 3: Chain 0: GUGAGG 6nt

Strand 4: Chain 0: CCGAGAG 7nt

Strand 5: Chain 0: CAGACC 6nt

Strand 6: Chain 0: GGAU 4nt

Strand 7: Chain 0: UCUGGUAG 8nt

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