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Searching for motif id 9624

Entry # 9624: 1Z58_j7_2-A832_2-A848_2-U954_2-C982_2-G1000_2-G1174_2-G1196

Primary Citation: (from PDB entry 1Z58)

M.AMIT R.BERISIO D.BARAM J.HARMS A.BASHAN A.YONATH . A CREVICE ADJOINING THE RIBOSOME TUNNEL: HINTS FOR COTRANSLATIONAL FOLDING. FEBS LETT. V. 579 3207 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:7-wayCluster:1Z58 j7 2-A832 2-A848 2-U954 2-C982 2-G1000 2-G1174 2-G1196 
NC-IUBMB Classification:Cluster Page
Angles: 16:43:45:56:58:69:70:78:86:100:103:116:128:129:129:132:134:145:145:160:171°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.98382Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 2: CAGC 4nt

Strand 2: Chain 2: GAAAUG 6nt

Strand 3: Chain 2: GUGAGG 6nt

Strand 4: Chain 2: CCGAGAG 7nt

Strand 5: Chain 2: AGACC 5nt

Strand 6: Chain 2: GGAUUCA 7nt

Strand 7: Chain 2: UGUCUGGUA 9nt

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