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Searching for motif id 8587

Entry # 8587: 1Y69_j7_0-G831_0-A848_0-U954_0-C982_0-C998_0-G1174_0-U1195

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI . X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:7-wayCluster:1Y69 j7 0-G831 0-A848 0-U954 0-C982 0-C998 0-G1174 0-U1195 
NC-IUBMB Classification:Cluster Page
Angles: 21:42:43:43:54:61:63:69:75:105:108:117:123:128:134:138:144:147:148:151:177°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.04862Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CAGC 4nt

Strand 2: Chain 0: CGAAAUG 7nt

Strand 3: Chain 0: GUGAGG 6nt

Strand 4: Chain 0: CCGAGAGG 8nt

Strand 5: Chain 0: CCAGACC 7nt

Strand 6: Chain 0: GGAUUCAA 8nt

Strand 7: Chain 0: UUGUCUGGUAG 11nt

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