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Searching for motif id 8586

Entry # 8586: 1Y69_j7_0-G831_0-A848_0-G951_0-C982_0-C998_0-G1174_0-U1195

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI . X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:7-wayCluster:1Y69 j7 0-G831 0-A848 0-G951 0-C982 0-C998 0-G1174 0-U1195 
NC-IUBMB Classification:Cluster Page
Angles: 21:42:44:56:58:60:65:67:96:108:108:109:113:125:126:138:145:147:148:153:154°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.00953Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: ACAGCCUC 8nt

Strand 2: Chain 0: CCGAAAUGU 9nt

Strand 3: Chain 0: GGGAGUGAGGC 11nt

Strand 4: Chain 0: GCCGAGAGGG 10nt

Strand 5: Chain 0: CCCAGACCA 9nt

Strand 6: Chain 0: UGGAUUCAAC 10nt

Strand 7: Chain 0: GUUGUCUGGUAGG 13nt

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