NIH logo
Searching for motif id 8584

Entry # 8584: 1Y69_j6_0-G44_0-G156_0-G192_0-C208_0-A239_0-C439

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI . X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:6-wayCluster:1Y69 j6 0-G44 0-G156 0-G192 0-C208 0-A239 0-C439 
NC-IUBMB Classification:Cluster Page
Angles: 18:23:42:50:61:75:87:99:115:127:136:146:154:155:157°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.22232Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGGAA 5nt

Strand 2: Chain 0: AGCC 4nt

Strand 3: Chain 0: GGAGAAGAAAGA 12nt

Strand 4: Chain 0: UCGAUUC 7nt

Strand 5: Chain 0: GAUCAGC 7nt

Strand 6: Chain 0: GCUAAAUACU 10nt

Valid XHTML 1.0 Transitional