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Searching for motif id 8081

Entry # 8081: 1W2B_j6_0-U2115_0-U2276_0-U2290_0-C2315_0-G2421_0-A2460

Primary Citation: (from PDB entry 1W2B)

L.FERBITZ T.MAIER H.PATZELT B.BUKAU E.DEUERLING N.BAN . TRIGGER FACTOR IN COMPLEX WITH THE RIBOSOME FORMS A MOLECULAR CRADLE FOR NASCENT PROTEINS NATURE V. 431 590 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:6-wayCluster:1W2B j6 0-U2115 0-U2276 0-U2290 0-C2315 0-G2421 0-A2460 
NC-IUBMB Classification:Cluster Page
Angles: 8:25:32:33:35:63:116:140:146:147:149:149:151:172:175°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.08208Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GUUUGAC 7nt

Strand 2: Chain 0: CUUUAC 6nt

Strand 3: Chain 0: GUACGC 6nt

Strand 4: Chain 0: GCGCCC 6nt

Strand 5: Chain 0: GGUCUAGCGAACC 13nt

Strand 6: Chain 0: GAUGACAGAAAAG 13nt

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