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Searching for motif id 3379

Entry # 3379: 1N36_j5_A-G57_A-G107_A-A315_A-C337_A-G350

Primary Citation: (from PDB entry 1N36)

J.M.OGLE F.V.MURPHY IV M.J.TARRY V.RAMAKRISHNAN . SELECTION OF TRNA BY THE RIBOSOME REQUIRES A TRANSITION FROM AN OPEN TO A CLOSED FORM CELL (CAMBRIDGE,MASS.) V. 111 721 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:5-wayCluster:1N36 j5 A-G57 A-G107 A-A315 A-C337 A-G350 
NC-IUBMB Classification:Cluster Page
Angles: 38:62:77:82:108:108:114:127:127:168°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.91866Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGGACGGGU 10nt

Strand 2: Chain A: AUGCAAGU 8nt

Strand 3: Chain A: ACAGGG 6nt

Strand 4: Chain A: CCCACUC 7nt

Strand 5: Chain A: GAGGCAGCAG 10nt

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