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Searching for motif id 11188

Entry # 11188: 2HGJ_j6_A-U2074_A-U2243_A-C2258_A-C2281_A-G2384_A-A2422

Primary Citation: (from PDB entry 2HGJ)

L.JENNER G.YUSUPOVA B.REES D.MORAS M.YUSUPOV . STRUCTURAL BASIS FOR MESSENGER RNA MOVEMENT ON THE RIBOSOME. NATURE V. 444 391 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:6-wayCluster:2HGJ j6 A-U2074 A-U2243 A-C2258 A-C2281 A-G2384 A-A2422 
NC-IUBMB Classification:Cluster Page
Angles: 12:29:35:36:41:63:114:140:140:143:144:147:155:164:176°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.52492Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUUUGA 6nt

Strand 2: Chain A: CUUUAC 6nt

Strand 3: Chain A: UCGC 4nt

Strand 4: Chain A: GCGCCC 6nt

Strand 5: Chain A: GGCCUAGUGAACC 13nt

Strand 6: Chain A: GAUCAACGGAUAAAAG 16nt

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